Whole digestive gland transcriptome of the cupped oyster Crassostrea gigas in response to different strains of the dinoflagellates Alexandrium
We explored the whole digestive gland transcriptome in the Pacific oyster Crassostrea gigas using Illumina sequencing technology and compare the expression patterns obtained in: i) oysters exposed experimentally at environmentally-realistic concentration to Alexandrium minutum Daoulas1257 strain isolated from the Bay of Brest in France producing only PSTs; ii) AM89BM strain, isolated from the Bay of Morlaix in France producing both PSTs and BECs; iii) CCMI1002 strain, isolated from Irish waters producing only BECs; and iv) control oysters fed with the non-toxic dinoflagellate Heterocapsa triquetra.
Simple
- Title
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Whole digestive gland transcriptome of the cupped oyster Crassostrea gigas in response to different strains of the dinoflagellates Alexandrium
- Date (Creation)
- 2015-03-01
- Date (Publication)
- 2017-10-18
- Citation identifier
- FR-330-715-368-00032-IFR_BIOINFO_TOXICITE_ALEXANDRIUM_MINUTUM_CRASSOSTREA_GIGAS
- Abstract
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We explored the whole digestive gland transcriptome in the Pacific oyster Crassostrea gigas using Illumina sequencing technology and compare the expression patterns obtained in: i) oysters exposed experimentally at environmentally-realistic concentration to Alexandrium minutum Daoulas1257 strain isolated from the Bay of Brest in France producing only PSTs; ii) AM89BM strain, isolated from the Bay of Morlaix in France producing both PSTs and BECs; iii) CCMI1002 strain, isolated from Irish waters producing only BECs; and iv) control oysters fed with the non-toxic dinoflagellate Heterocapsa triquetra.
- Credit
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Ifremer - Laboratoire Physiologie des Invertébrés, ANR ACCUTOX
- Point of contact
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Organisation name Individual name Electronic mail address Role IFREMER
Huvet Arnaud
Local service desk UBO
Fabioux Caroline
Author Vienna Biocenter
Mat Audrey
Author CNRS
Hegaret Helene
Author INRAE
Klopp Christophe
Author CNRS
Soudant Philippe
Author IFREMER
Huvet Arnaud
Author IFREMER
Publisher
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GEMET - INSPIRE themes, version 1.0
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Habitats et biotopes
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Thèmes Sextant
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/Milieu biologique/Bio-Informatique
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Type de jeux de donnée ODATIS
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/Séquences
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ODATIS aggregation parameters and Essential Variable names
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Bioinformatique
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- Use limitation
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Accès restreint jusqu'à la publication de l'article
- Access constraints
- Copyright
- Use constraints
- Copyright
- Language
- English
- Character set
- UTF8
- Topic category
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- Environment
- Reference system identifier
- EPSG / WGS 84 (EPSG:4326) / 8.6
- Distribution format
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Name Version
- OnLine resource
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Protocol Linkage Name NETWORK:LINK
/home/ref-bioinfo-public/ifremer/pfom/AmiTox
- OnLine resource
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Protocol Linkage Name WWW:LINK-1.0-http--metadata-URL
https://doi.org/10.12770/2a2852a9-7179-4660-949e-c8d8226f13db Digital Object Identifier (DOI)
- Hierarchy level
- Dataset
- Statement
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Les efflorescences de microalgues productrices de toxines ont des impacts socio-économiques et écologiques majeurs. En France, des efflorescences de microalgues toxiques du genre Alexandrium peuvent entraîner la contamination des coquillages et s’avérer toxiques pour les consommateurs. Ces microalgues produisent différents types de toxines, des toxines paralysantes (PST) d'une part
et des composés allélopathiques d'autre part. Le présent travail initie des études sur les perturbations moléculaires spécifiques et synergiques des toxines et composés allélopathiques.
Metadata
- File identifier
- 2a2852a9-7179-4660-949e-c8d8226f13db
- Metadata language
- Français
- Character set
- UTF8
- Hierarchy level
- Dataset
- Date stamp
- 2024-02-28T15:33:47.222Z
- Metadata standard name
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ISO 19115:2003/19139 - SEXTANT
- Metadata standard version
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1.0
- Metadata author
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Organisation name Individual name Electronic mail address Role IFREMER
Huvet Arnaud
Local service desk