Title

Diversity of bacterial communities associated with Ostreopsis cf ovata bloom in NW Mediterranean

Date (Creation)

2021-08-18

Date (Publication)

2023-07-17

Citation identifier

FR-330-715-368-00032-IFR_BIOINFO_OSTREOPSIS_20230126_GENALG_EB

Abstract

16S rDNA gene (V3-V4 region) were sequenced within one run using the 2x250 paired-end method on an Illumina MiSeq instrument with a MiSeq Reagent Kit V3 chemistry (Illumina).

Credit

Ifremer

Point of contact

Organisation name	Individual name	Electronic mail address	Role
IFREMER		sismer@ifremer.fr	Publisher
IFREMER	Briand Enora	Enora.Briand@ifremer.fr	Author
Sorbonne université	Lemée Rodolphe	rodolphe.lemee@obs-vlfr.fr	Author
IFREMER	Chomerat Nicolas	Nicolas.Chomerat@ifremer.fr	Author
IFREMER	Noel Cyril	Cyril.Noel@ifremer.fr	Author

GEMET - INSPIRE themes, version 1.0

• Habitats and biotopes

Thèmes Sextant

• /Biological Environment/Bioinformatics

ODATIS aggregation parameters and Essential Variable names

• Bioinformatics

User contact info

Organisation name	Individual name	Electronic mail address	Role

Use limitation

CC-BY (Creative Commons - Attribution)

Access constraints

License

Use constraints

License

Spatial representation type

Grid

Language

English

Character set

UTF8

Reference system identifier

EPSG / WGS 84 (EPSG:4326) / 8.6

Distribution format

Name	Version

OnLine resource

Protocol	Linkage	Name
NETWORK:LINK	/home/ref-bioinfo/ifremer/genalg/ostreopsis

Hierarchy level

Dataset

Statement

This study investigated the bacterial diversity associated with Ostreopsis cf. ovata during different phases of a bloom development (pre-, during- and post-bloom) in NW Mediterranean (Villefranche bay, France).

Metadata

File identifier

521cd5f8-f5e9-416d-95f1-0e24d4a5b630

Metadata language

English

Character set

UTF8

Hierarchy level

Dataset

Date stamp

2023-07-17T16:10:05.517Z

Metadata standard name

ISO 19115:2003/19139 - SEXTANT

Metadata standard version

1.0

Metadata author

Organisation name	Individual name	Electronic mail address	Role
IFREMER	Briand Enora	Enora.Briand@ifremer.fr	Local service desk