Pinctada margaritifera genome assembly, raw reads
Les données de séquences brutes qui ont été utilisées pour assembler le génome de l'huître perlière, Pinctada margaritfera
| Data accessChemin d'accès | /home/ref-bioinfo/ifremer/rmpf/pmarg_genome |
| Date(s)Date(s) |
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| Author(s)Auteur(s) | Vidal-Dupiol Jeremie
(IFREMER)
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| SourceSource |
Ifremer - Unité Ressources Marines en Polynésie |
| LineageGénéalogie |
Draft genome assembly produce by platanus using default parameters. The libraies used are: i) an illumina shotgun library (125pb PE, insert size 400pb, sequencing depht 150X); ii) a 3kb mate paire library (125pb PE, insert size 3000 pb, sequencing depht 50X); iii) a 10kb mate paire library (125pb PE, insert size 10000 pb, sequencing depht 15X). The shotgun library was cleaned using trimmomatic and corrected using SGA-ICE. The mate-paire libraries were cleaned and corrected using NextClip. |
| ConstraintsContraintes |
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| Spatial informationsInformations géographiques |
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