Pinctada margaritifera genome assembly, raw reads

Date(s) (Creation)
Author(s):
Affiliation(s) 1 : IFREMER
Credit Ifremer - Unité Ressources Marines en Polynésie
ID FR-330-715-368-00032-IFR_BIOINFO_GENOME_PINCTADA_MARGARITIFERA
Abstract Les données de séquences brutes qui ont été utilisées pour assembler le génome de l'huître perlière, Pinctada margaritfera
Keywords Habitats and biotopes
Lineage Draft genome assembly produce by platanus using default parameters. The libraies used are: i) an illumina shotgun library (125pb PE, insert size 400pb, sequencing depht 150X); ii) a 3kb mate paire library (125pb PE, insert size 3000 pb, sequencing depht 50X); iii) a 10kb mate paire library (125pb PE, insert size 10000 pb, sequencing depht 15X). The shotgun library was cleaned using trimmomatic and corrected using SGA-ICE. The mate-paire libraries were cleaned and corrected using NextClip.
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Restricted circulation or disclosure.