Pinctada margaritifera genome assembly, raw reads
Les données de séquences brutes qui ont été utilisées pour assembler le génome de l'huître perlière, Pinctada margaritfera
Data access Chemin d'accès |
/home/ref-bioinfo/ifremer/rmpf/pmarg_genome
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Date(s) Date(s) |
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Author(s) Auteur(s) |
Vidal-Dupiol Jeremie
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IFREMER
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Source Source |
Ifremer - Unité Ressources Marines en Polynésie |
Lineage Généalogie |
Draft genome assembly produce by platanus using default parameters. The libraies used are: i) an illumina shotgun library (125pb PE, insert size 400pb, sequencing depht 150X); ii) a 3kb mate paire library (125pb PE, insert size 3000 pb, sequencing depht 50X); iii) a 10kb mate paire library (125pb PE, insert size 10000 pb, sequencing depht 15X). The shotgun library was cleaned using trimmomatic and corrected using SGA-ICE. The mate-paire libraries were cleaned and corrected using NextClip. |
Constraints Contraintes |
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Spatial informations Informations géographiques |
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