Inter and intra-specific transcriptional and phenotypic responses of Pseudo-nitzschia under different nutrient conditions
fastq files obtained following a RNA-seq experiment (Illumina HiSeq3000, 2x150bp) investigating the expression of seven strains of Pseudo-nitzschia (two P. fraudulenta strains, two P. pungens strains and three P. australis strains) in three experimental media.
Data access Chemin d'accès |
/home/ref-bioinfo-public/ifremer/dyneco/pseudo-nitzschia
|
Date(s) Date(s) |
|
Author(s) Auteur(s) |
Lema Anais Kimberley
(
IFREMER
)
Quere Julien ( IFREMER ) Le Gac Mickael ( IFREMER ) |
Contact(s) Contact(s) |
IFREMER
|
Source Source |
Ifremer Dyneco/Pelagos |
Lineage Généalogie |
Dataset generated following a RNAseq experiment. RNA were extracted in triplicates during late exponential phase for 3 strains of Pseudo-nitzschia australis, 2 strains of P. pungens, and 2 strains of P. fraudulenta in 3 media with contrasting nutrient concentration. Libraries were prepared using Illumina TruSeq stranded mRNA kit. These fastq files correspond to demultiplexed raw PE reads (2x150bp) generated using an Illumina HiSeq3000. |
Constraints Contraintes |
|
Spatial informations Informations géographiques |
|
Citation proposal Proposition de citation
Lema Anais Kimberley , Quere Julien , Le Gac Mickael .Inter and intra-specific transcriptional and phenotypic responses of Pseudo-nitzschia under different nutrient conditions.IFREMER
http://dx.doi.org/10.12770/78bba5d5-2112-467c-b35c-722992ded656