Fish NGS sequences associated to cetaceans from eDNA samples
In order to better characterize the fish biodiversity associated to the presence of cetaceans, especially the common Dolphin, from the Bay of Biscay, sequences from a 16S fragment were obtained from water samples acquired close to groups of dolphins.
| Data accessChemin d'accès | /home/ref-bioinfo-extranet/ifremer/marbec/delmoges-fish-2022 |
| Date(s)Date(s) |
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| Author(s)Auteur(s) | Lapegue Sylvie
(IFREMER)
Malkocs Tamas (Université de Brest) Cornette Florence (IFREMER) Méndez-Fernandez Paula (La Rochelle Université) Spitz Jérôme (La Rochelle Université) Bonin Aurélie (Argaly) Reisser Celine (IFREMER) Arnaud-Haond Sophie (IFREMER) Noel Cyril (IFREMER) Viricel-Pante Amelia (Université de Brest) |
| Contact(s)Contact(s) | IFREMER
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| SourceSource |
IFREMER (MARBEC/LEGPM) |
| LineageGénéalogie |
A total of 21 Waterra capsules were used to samples about 80l of water close to groups of dolphins in the Bay of Biscay in June 2022. DNA was extracted and libraries were construted for a 16S mitochondrial fragment. After purification, 8 replicates of each sample were submitted to NGS sequencing. |
| ConstraintsContraintes |
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| Spatial informationsInformations géographiques |
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Citation proposalProposition de citation
Lapegue Sylvie, Malkocs Tamas, Cornette Florence, Méndez-Fernandez Paula, Spitz Jérôme, Bonin Aurélie, Reisser Celine, Arnaud-Haond Sophie, Noel Cyril, Viricel-Pante Amelia (2024).Fish NGS sequences associated to cetaceans from eDNA samples.IFREMER
https://doi.org/10.12770/7c2b753e-ba6d-46a9-ba8d-56e5a075970d
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